Tweaks to the notebook

Author: pgleeson

notebook/notebook.ipynb

@@ -6,7 +6,7 @@
     "tags": []
    },
    "source": [
-    "# Interactive Tutorial for Hodgkin Huxley Model on Juypter Lab"
+    "# Interactive Tutorial for Hodgkin Huxley Model"
    ]
   },
   {
@@ -43,7 +43,7 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "<font size=\"5\">Execute Hodgkin Huxley Model</font>"
+    "<font size=\"5\">Execute the Hodgkin Huxley Model</font>"
    ]
   },
   {
@@ -54,7 +54,7 @@
     {
      "data": {
       "application/vnd.jupyter.widget-view+json": {
-       "model_id": "1d3c73d3138d47af8f717354d52f302c",
+       "model_id": "05caa7139d7b4e83afec0f388766963d",
        "version_major": 2,
        "version_minor": 0
       },
@@ -68,7 +68,7 @@
     {
      "data": {
       "application/vnd.jupyter.widget-view+json": {
-       "model_id": "814554308e89435dac419867021cf088",
+       "model_id": "44e8d73980a44a4e9fbfe56ac6695863",
        "version_major": 2,
        "version_minor": 0
       },
@@ -118,10 +118,13 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "1) Starting from the bottom, the first (bottom-most) plot shows neural membrane voltage activity. The spikes here are called \"action potentials\" and correspond directly to the current/time plot. Outflux of *Na* directly followed by influx of *K* causes the spiking activity observed in the plot.\n",
-    "2) The second plot from the bottom shows the activation/inactivation parameters of the ion channels in the neuron. \n",
-    "3) Third plot from the bottom (the current/time plot) makes this more concrete, showing the influx (negative y-axis) and outflux (positive y-axis) of ions passing through each type of ion channel being modeled.\n",
-    "4) The top-most plot, shows current injected into the cell membrane at times 150ms for default values. The injection current can be changed from above slider for amplitude, duration and delay."
+    "1) Starting from the bottom, the first (bottom-most) plot shows the **neural membrane voltage activity**. The spikes here are called \"action potentials\" and correspond directly to the current/time plot. Outflux of *Na* directly followed by influx of *K* causes the spiking activity observed in the plot.\n",
+    "\n",
+    "2) The second plot from the bottom shows the **activation/inactivation variables** of the ion channels in the neuron, activation variable m and inactivation variable h for *Na*, and activation variable n for *K*.\n",
+    "\n",
+    "3) Third plot from the bottom (the current/time plot) makes this more concrete, showing the influx (negative y-axis) and outflux (positive y-axis) of **ionic currents** passing through each type of ion channel being modeled.\n",
+    "\n",
+    "4) The top-most plot, shows **current injected into the cell membrane**. The injection current can be changed from above slider for amplitude, duration and delay."
    ]
   },
   {
@@ -148,7 +151,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.9.7"
+   "version": "3.7.7"
   }
  },
  "nbformat": 4,