Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
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May 4, 2026 - Python
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structural-mri
Here are 13 public repositories matching this topic...
Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)
machine-learning graph neuroscience vbm feature-extraction neuroimaging network-analysis gray-matter anatomical-mri cortical-network freesurfer voxel-based structural-mri cortical-thickness thickness mindboggle
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Apr 4, 2026 - Jupyter Notebook
Intensity normalization of structural MRIs using RAVEL
image-processing mri brain-imaging normalization image-preprocessing structural-mri ravel smri image-normalization
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Sep 7, 2023 - HTML
A python package that imitates functions from the Computational Anatomy Toolbox - CAT12.
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Aug 2, 2021 - Python
Non-isomorphic Inter-modality Graph Alignment and Synthesis.
deep-neural-networks deep-learning brain super-resolution brain-connectivity structural-mri network-neuroscience brain-networks graph-neural-networks pytorch-geometric graph-alignment graph-superresolution generative-learning domain-alignment functional-mri predictive-medicine inter-modality-learning connectome-generation
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Nov 15, 2021 - Python
StairwayGraphNet for inter- and inter-modality graph superresolution.
deep-learning predictive-modeling brain-connectivity adversarial-learning structural-mri gnns graph-neural-networks multi-modal-imaging graph-superresolution generative-learning functional-mri
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Apr 7, 2023 - Python
Pipeline for Cortical and Subcortical SC and FC
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Dec 1, 2025 - Shell
Nipype based application to detect FCD lesion in MRI negative epilepsy patients
image-processing neuroimaging bids structural-mri normative-modelling focal-cortical-dysplasia brain-im
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Mar 4, 2022 - Python
A toolbox to detect cortical anomalies in sMRI (T1w) through Laplace–Beltrami spectral descriptors and geodesic-aware GP normative modeling on the cortical manifold.
gaussian-processes probabilistic-modeling surprise structural-mri riemannian-manifold normative-modelling laplace-beltrami spectral-descriptors t1w surprise-maps spectral-shape matern-gp
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Apr 23, 2026 - Python
Graduate clinical AI system for ASD detection from sMRI — NIfTI pipeline, Hybrid CNN-ViT (AUC 0.997), Grad-CAM + LIME explainability, MC-Dropout uncertainty, LLM clinical narrative, deployed on Hugging Face Spaces.
pytorch medical-imaging autism uncertainty-quantification lime structural-mri explainable-ai gradcam streamlit clinical-ai model-card hugging-face asd-detection hybrid-cnn-vit
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Apr 25, 2026 - Jupyter Notebook
Masters thesis in CogNeuro with Center for Lifespan Changes in Brain and Cognition
machine-learning r machine-learning-algorithms tidyverse cross-validation xgboost classification neuroimaging data-preprocessing imbalanced-data cognitive-neuroscience ocd structural-mri abcd-study tidymodels child-mental-health internalizing-symptoms informant-effects brain-morphometry
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Jul 29, 2025 - HTML
B.Tech 2023 capstone — CNN vs Vision Transformer for ASD detection from structural MRI (ABIDE-I, 1,067 subjects). Established CNN baseline (AUC 0.978) and documented ViT failure from scratch. Foundation for graduate Phase 2.
computer-vision deep-learning cnn abide pytorch kaggle medical-imaging classification neuroimaging autism structural-mri vision-transformer asd-detection
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Apr 25, 2026 - Jupyter Notebook
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